the-jordan-lab/docs
1
0
Fork 0
mirror of https://github.com/the-jordan-lab/docs.git synced 2025-05-09 21:32:38 +00:00
Code Issues Packages Projects Releases Wiki Activity

Added experiment documents and Slack integration guides

Browse Source
This commit is contained in:
james-m-jordan 2025-05-09 07:50:25 -04:00
parent 326629eb28
commit d13c52fef7
5 changed files with 40 additions and 0 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

33
Experiments/EXP-0221.md Normal file
View File

@ -0,0 +1,33 @@
EXP-0222 (031625SC)
``` Markdown
| Immunoblot Procedure: SC031625 | | | |
| :---- | :---- | :---- | :---- |
| ![People][image1] Assignee | ![No type][image2] Title | ![Dates][image3] Date | ![Dropdowns][image4] Status |
| Person | Ask JJ for cells (\>3 days prior to experiment start date) [Plate request form](https://drive.google.com/open?id=1xkdAgPquTjzG129axQ9xhwQDUVCwjsA4erdMhIgwJ1E) | Mar 14, 2025 12:00 PM EDT | Completed |
| Person | Seed cells while performing reverse transfection. Prep sheet: [Cell preparation\_SC031625](https://docs.google.com/spreadsheets/u/1/d/1M_X0ViY-cYp9iz3mEjFz0TUkw-XhDgoDl3KLLXqBOIc/edit) | Mar 16, 2025 12:00 PM EDT | Completed |
| Person | Treat cells. Treatment sheet: [Cell Treatment\_SC031625](https://docs.google.com/spreadsheets/u/1/d/1TUCNFyDnfUGjU7i-vRkSFpb4ZMadeCheNkm1uGX1vsw/edit) | Mar 17, 2025 | Completed |
| Person | Extract, freeze, and quantify protein. Protein prep sheet:[Protein preparation\_SC031625](https://docs.google.com/spreadsheets/u/1/d/1L7KuYVufJU5zx0NMPXHMb9bsyWHMvMPAa844CtBJy_8/edit) \-80 C sample submission: [Sample Submission](https://drive.google.com/open?id=1Oox80CP6oEVm3IVtkPSENpUCua0RylQz3HFP5BZhjxw) | Mar 18, 2025 | Completed |
| Person | Run gel, transfer protein, immunostain. Immunoblotting sheet: [Immunoblot design\_SC031625](https://docs.google.com/spreadsheets/u/1/d/1jnyg3GbMP9QWm4sakLElvwrWYwfmW78Rg1YbjYBzZwc/edit) | Mar 20, 2025 | Completed |
| Person | Develop and image. Immunoblotting sheet: [Immunoblot design\_SC031625](https://docs.google.com/spreadsheets/u/1/d/1jnyg3GbMP9QWm4sakLElvwrWYwfmW78Rg1YbjYBzZwc/edit) | Mar 21, 2025 | Completed |
| Person | Archive raw images folder. Raw images: [ChemiDoc Images 2025-03-28\_14.36.48](https://drive.google.com/open?id=1UCOyxJ8i7SBwZgVMAgMn3ip025YbZpYf) Submit to archive form: [Quick submit to JL Shared Drive](https://drive.google.com/open?id=1htCicf5JZwv327t6XYipgI4Aj6Rs6IxzxphSCSyqzU8) | Mar 21, 2025 | Completed |
| Person | Analyze results \[Immunoblot analysis pipeline\] Analysis folder: Submit to archive form: [Quick submit to JL Shared Drive](https://drive.google.com/open?id=1htCicf5JZwv327t6XYipgI4Aj6Rs6IxzxphSCSyqzU8) | Mar 21, 2025 | In progress |
| Person | Strip membrane and immunostain new targets (1/2). Immunoblotting sheet: [Immunoblot design\_SC031625](https://docs.google.com/spreadsheets/u/1/d/1jnyg3GbMP9QWm4sakLElvwrWYwfmW78Rg1YbjYBzZwc/edit) | Apr 4, 2025 | Completed |
| Person | Develop and image. | Apr 7, 2025 | Completed |
| Person | Archive raw images folder. Raw images: [ChemiDoc Images 2025-04-08\_13.27.00](https://drive.google.com/open?id=12kXB2ZnLaZDD21cg5F-JBrNjHpv803mR) Submit to archive form: [Quick submit to JL Shared Drive](https://drive.google.com/open?id=1htCicf5JZwv327t6XYipgI4Aj6Rs6IxzxphSCSyqzU8) | Apr 7, 2025 | Completed |
| Person | Analyze results Analysis folder: Submit to archive form: [Quick submit to JL Shared Drive](https://drive.google.com/open?id=1htCicf5JZwv327t6XYipgI4Aj6Rs6IxzxphSCSyqzU8) | Apr 7, 2025 | In progress |
| Person | Strip membrane and immunostain new targets (2/2). Immunoblotting sheet: [Immunoblot design\_SC031625](https://docs.google.com/spreadsheets/u/1/d/1jnyg3GbMP9QWm4sakLElvwrWYwfmW78Rg1YbjYBzZwc/edit) | Apr 7, 2025 | In progress |
| Person | Develop and image. | Apr 8, 2025 | Not started |
| Person | Archive raw images folder. Raw images: [ChemiDoc Images 2025-04-09\_16.55.09](https://drive.google.com/open?id=142Q5Ulebn0fCOYemiPy4XNyNmNa1ErbY) Submit to archive form: [Quick submit to JL Shared Drive](https://drive.google.com/open?id=1htCicf5JZwv327t6XYipgI4Aj6Rs6IxzxphSCSyqzU8) | Apr 8, 2025 | Not started |
| Person | Analyze results. Analysis folder: Submit to archive form: [Quick submit to JL Shared Drive](https://drive.google.com/open?id=1htCicf5JZwv327t6XYipgI4Aj6Rs6IxzxphSCSyqzU8) | Apr 8, 2025 | Not started |
| Person | Create experiment summary doc [Experiment summary Template](https://docs.google.com/document/u/1/d/1zUsWw8EPjZ6zO2grJocXAxRnnqYqbjy-4KgWZeeI2Vc/edit) | Apr 10, 2025 | Not started |
| Person | Discuss results with JJ [Weekly Research Check-In Report Template](https://docs.google.com/presentation/u/1/d/1MztTRHV0CZj8I8DjSUT2bO01AkEYdcigQ5VWIdblOMA/edit) | Apr 11, 2025 4:00 PM EDT | Not started |
[image1]: <data:image/png;base64,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>
[image2]: <data:image/png;base64,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>
[image3]: <data:image/png;base64,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>
[image4]: <data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABQAAAAQCAYAAAAWGF8bAAAAAXNSR0IArs4c6QAAAm9JREFUOE99VLFuE0EUnDkcc0h8QoqUKXGBAAmEHfv2bCkpKFF+gAIpIAWJLk6HRCSIRMEPRJQURLJvfca2QAJEYQqKlBT5BCTOdnIP7e6dfQ4RV1jet/vmZnbmHVF4CEDma7MCXM1Vl/eLnYtNmlMU2ibXkAFRIBbncpj87GLXdBJ07QVm8xNm23GzpfmPKWQ6TNHWL+j6rxQLaKAzoKw3f90SoQx/LqtarfqlcvkxiW0B1wHxDRnLbkk6z0j5ISmOzqbTt8PRMHFSrGint9Vsrc0k7RBYB+VrmsqIHpMFUMbF3G0q10nvFgR3ATkp0Wt1u91fTguAaq3ml8orYwCrInzY19Fx7uHiJv+1p65Ug8R7AqezyawyHA4SGlfqQfgElFcpEAwiHedOO6uKN5z9z0umV6lNAh8geBbr3oFlGDTVdwGSuNu752KUJ++SkBoGBVdtv1JfhPD7ka7Y2NTDcCZID/tRvGtZFRgYU+pN1aZwb+k1xH7c1W1zdCMMXhDciSN9zTEMwz/nOD/8GMXP5yORk3MWI2gGbUmxZwl63I87UTubAWyo4MCDtxNH0UrGUI0pTHo6uuPoZVG/ENCgpdrmVuNOr10ch0YYfKJHv9fRNy1gQ6ldIV6KYKuv9XF+TYtRnKfZhpLZWDq5qkFBD+DTvtavXWxMoK+WxxSspuSDvtaxNcYmn5DchCXGxIZSmx7lHcHT2WRSGY2GSTYDRNgM186yYIvwc8r0m+fxt0M14+JEmoZUxCe9+xC5DeBnyfO2bLAN+0UwiFqt6l8plx+B2GaKG0IpXfhIuRAQCYATER6dT6dvBsOBWdvnL2nXGC2GCjr+AAAAAElFTkSuQmCC>
```

0
Experiments/EXP-0222.md Normal file
View File

7
Experiments/EXP-0223.md Normal file
View File

@ -0,0 +1,7 @@
EXP-0223 TO BE STANDARDIZED
1. 2025-04-11SC
Link to raw BCA https://docs.google.com/spreadsheets/d/1vn_3y_3fOiDWzV3eyPJpE6NkQk9Q9zw99t2zmPMzYYc/edit?gid=1853989824#gid=1853989824
Link to BCA assay plate map
2. JORDAN 2025-04-29*
3. JORDAN 2025-05-02*
4. JORDAN 2025-05-02*

0
guides/how-to-integrate-with-slack-easier.md Normal file
View File

0
guides/how-to-integrate-with-slack.md Normal file
View File