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Author SHA1 Message Date
james-m-jordan
b6339711f1 Add data and analysis for EXP-0224 YBX1-CEBPA CoIP experiment 2025-05-08 01:53:41 -04:00
james-m-jordan
dd1e0ba64b Add ROBOT_README.md 2025-05-07 23:52:29 -04:00
james-m-jordan
89474a95af Reorganize documentation files and update setup instructions 2025-05-07 23:52:29 -04:00
GitHub Action
ce08ebec26 Auto-update ROBOT_README.md [skip ci] 2025-05-07 19:18:20 +00:00
james-m-jordan
02b275ba0c Merge remote changes with reverse transfection protocol update 2025-05-07 19:17:59 +00:00
james-m-jordan
ea94fce1b2 Update mRNA stability protocol to use reverse transfection method 2025-05-07 19:17:34 +00:00
GitHub Action
7409320b7f Auto-update ROBOT_README.md [skip ci] 2025-05-07 19:05:17 +00:00
james-m-jordan
890ac97a83 Merge remote changes with local updates to experiment protocols 2025-05-07 19:04:57 +00:00
james-m-jordan
b503d8c8b7 Update experiment protocols for mRNA stability and Co-IP assays 2025-05-07 19:04:24 +00:00
GitHub Action
487d4aa866 Auto-update ROBOT_README.md [skip ci] 2025-05-07 14:28:40 +00:00
james-m-jordan
4ab492fffd Update project structure and add experiment files 2025-05-07 14:28:10 +00:00
james-m-jordan
1ee288e07b Implement frictionless GitHub CLI auth, auto-issue tracking, and ROBOT_README.md for AI context 2025-05-07 10:37:59 +00:00
james-m-jordan
ea51502f93 Add OpenAI API key config and environment setup guide 2025-05-07 02:58:53 +00:00
james-m-jordan
8201dddc40 gsheet-to-xlsx conversion for testing 2025-05-07 02:22:10 +00:00
james-m-jordan
dd11f785c2 Yaml protocol improvements 2025-05-07 01:43:05 +00:00
james-m-jordan
cf6bdefd53 codespace should have windsurf and jupyter on startup now; started organizing project folders 2025-05-06 22:39:14 +00:00
james-m-jordan
f6f4c81918 Fix Codespace environment setup with startup scripts and diagnostics 2025-05-06 15:53:10 -04:00
james-m-jordan
052c8fda97 Reorganize repository structure and update documentation for GitHub integration 2025-05-06 09:33:40 -04:00
james-m-jordan
fd80fbf774 Add Ybx1 knockdown mRNA stability experiment files, protocol, project, and agent case study log 2025-05-06 08:06:35 -04:00
james-m-jordan
219324a042 Onboarding: Add user-friendly quick start, chat examples, and Lab Agent Guide v2 for seamless researcher experience 2025-05-05 22:37:31 -04:00
james-m-jordan
eceed8a576 got jupyter working 2025-05-05 20:39:34 -04:00
james-m-jordan
064d39a163 Add cation-pi directory with histidine interface files and models 2025-05-05 16:30:25 -04:00
james-m-jordan
866139051a
Update README.md 2025-05-05 15:05:50 -04:00
james-m-jordan
61e9811071 Add comprehensive .gitignore for sensitive files 2025-05-05 11:38:25 -04:00
james-m-jordan
7f12fb2bfb
Initial commit 2025-05-05 10:24:10 -04:00